Bilal Shaikh
Biomedical Software Developer
Working on developing tools to enable large scale models of biology
Related
- BpForms and BcForms: a toolkit for concretely describing non-canonical polymers and complexes to facilitate global biochemical networks
- BioSimulations
- BioSimulators
- RunBioSimulations: an extensible web application that simulates a wide range of computational modeling frameworks, algorithms, and formats
- runBioSimulations
Publications
To facilitate biochemical research, we developed Datanator, an integrated database and set of tools for finding clouds of multiple types of molecular data about specific molecules and reactions in specific organisms and environments, as well as data about chemically-similar molecules and reactions in phylogenetically-similar organisms in similar environments.
Yosef D Roth, Zhouyang Lian, Saahith Pochiraju, Bilal Shaikh, Jonathan R Karr